All Channels | Provides the combined color channels of the current image. |
Channels | Provides each color channel of the current image. |
Combined Channels | Provides both the combined channels and the separate channels of the current image. This is the node that is included when GA3 is first opened. |
Selected Channels | Provides two categories of channels: the channels selected in the drop down menu (Selected) and all others (Other).
|
MxN Pixels | Creates a new channel of the specified bit depth and sets all intensity values to the specified value. Dimensions do not seem to matter. |
Deep Sim | Reconstructs the original image as a deep sim. Does not work without proper data. |
Deep Sim z-stack | Reconstructs the original z-stack as a deep sim. Does not work without proper data. |
Binaries | If the current image includes binary layers (ex. another GA3 was run previously to generate one), provides the binary layers as one channel. |
Selected Binaries | If the current image includes binary layers, provides the selected binary layers as one channel (Selected) and every other binary channel as another (Other). |
Single Binary | If the current image includes binary layers, provides the selected binary layer. |
ROI | If the current image includes a region of interest, provides it as a binary layer. |
Load Results | Loads results from a previously run analysis. |
Load & Concatenate | Loads results from a previously run analysis and appends the input table to it. |
Input Folder | Loads records from a selected folder. Could not get it to load an Excel document or a CSV file, so not so sure how to use this. |
Input Number | Creates a table with the written number as a single entry. |
Input Text | Creates a table with the written text as a single entry. |
Color Image | Imports an image from a selected file. The image can be used like an additional channel.
|
Binary from ND2 | Imports a binary layer from a selected ND2 file (a Nikon camera image file format, not a Miata). |
Binary from CSV | Imports a binary layer from a selected comma-separated values file. |
Table from CSV | Imports a table from a selected comma-separated values file. |
Table from HDF5 | Imports a table from a selected hierarchical data format 5 file (a file type meant for storing lots of data that contains multidimensional array data and array containers). |
Color to Single TIFs | Exports a color layer to a tag image file format file of the specified name in the specified location, which is a file type good for storing metadata. For multi-frame images, numbering needs to be set to store all the data as separate tif files. |
Binary to SVGs | Saves an input binary layer to a scalable vector graphics file format in the selected folder. Can choose fill opacity and object border opacity.
|
Split to Multipoint | Converts a single image into multiple nd2 images using an input table to determine multipoint regions. Can set width and height of multipoints. |
Table to CSV | Exports an input table as a comma-separated values file in the specified location. |
Table to HDF5 | Exports an input table as a hierarchical data format 5 file (a file type meant for storing lots of data that contains multidimensional array data and array containers) in the specified location. |
Load Last Color | Gets a previous color image from a loop stored with Save Last Color. Could be useful for tracking changes between frames. |
Save Last Color | Temporarily stores the current frame so it can be used by Load Last Color and must be connected to it. Could be useful for tracking changes between frames. |
Load Last Binary | Loads a temporary binary layer from the previous frame of a loop stored with Save Last Binary. Could be useful for tracking changes. |
Save Last Binary | Temporarily stores a binary layer in the current frame that can be recalled later by Load Last Binary and must be connected to it. Could be useful for tracking changes between frames. |
Load Last Table | Loads a temporarily stored table from Save Last Table. Could be useful for tracking changes between frames. |
Save Last Table | Temporarily saves a table from the current frame that can be used later by Load Last Table and must be connected to it. Could be useful for tracking images between frames. |
Visible Channels | A tool for converting visible channels into images to present. Can change color scale from original to a psuedocolor scheme. Does not show up in preview, need to run analysis to see output.
|
Visible Binaries | A tool for converting binary overlays into images for presentation. Can choose to show object IDs and set binary transparency.
|
Visible Tables | A tool for organizing tables for presentation. Does not display in preview, need to run analysis to see the output. I couldn’t adjust anything; the output just had a window with the input tables.
|
Save Pictures | Saves the connected color channels so they appear after the analysis is run. This is the node included by default at the bottom of the window. |
Save Binaries | Saves the connected binary channels so they appear after the analysis is run. This is the node included by default at the bottom of the window. |
Save Tables | Saves the connected tables so they appear after the analysis is run. This is the node included by default at the bottom of the window. |